INDUSAnalysis

Release:

0.1.0

INDUSAnalysis is a Python package to analyze Molecular Dynamics simulation data for solvated protein systems generated using the GROMACS implementation of INDUS.

Installation

Source code is available from https://github.com/apallath/INDUSAnalysis

Obtain the sources with git

git clone https://github.com/apallath/INDUSAnalysis.git
  1. Install requirements

pip install -r requirements.txt
  1. Build C extensions

python setup.py build_ext --inplace
  1. Install package [in editable state]

pip install [-e] .

Running tests

  1. For unit tests

cd tests_unit
pytest
  1. For integration tests

cd tests_integration
pytest

Documentation